FunSeq2.1.0 pre-built data context refers to original published version
Fu et al, 2014
Download FunSeq2.1.0 tar.gz folder
FunSeq2_data
FunSeq2_DC2 pre-built data context contains annotations from PCAWG OCT, 2015
1kg.phase1.snp.bed.gz
1kg.phase1.snp.bed.gz.tbi
All_hg19_RS.bw
ENCODE.annotation.gz
ENCODE.tf.bound.union.bed.gz
GENE.strong_selection.txt
README.txt
cancer_recurrence.tar.gz
drm.gene.bed
gencode.tar.gz
gene_lists.tar.gz
hot_region.bed
human_ancestor_GRCh37_e59.fa
human_ancestor_GRCh37_e59.fa.fai
motif.PFM
motif.score.cut
networks.tar.gz
reference_genome.fa
reference_genome.fa.fai
regulatory.network
sensitive.nc.bed
ultra.conserved.hg19.bed
user_annotations.tar.gz
weighted.score.txt
Alternative link to download tar.gz folder with all the data files
FunSeq2_DC2.tar.gz
Download FunSeq2_DC2 source code
FunSeq2_DC2_source.tar
Download FunSeq2 dependencies
FunSeq2 dependencies
Download sample variant input files for running FunSeq2
sample_input.bed
sample_input.vcf