• FunSeq2.1.0 pre-built data context refers to original published version Fu et al, 2014
• Download FunSeq2.1.0 tar.gz folder FunSeq2_data
• FunSeq2_DC2 pre-built data context contains annotations from PCAWG OCT, 2015
• 1kg.phase1.snp.bed.gz
• 1kg.phase1.snp.bed.gz.tbi
• All_hg19_RS.bw
• ENCODE.annotation.gz
• ENCODE.tf.bound.union.bed.gz
• GENE.strong_selection.txt
• README.txt
• cancer_recurrence.tar.gz
• drm.gene.bed
• gencode.tar.gz
• gene_lists.tar.gz
• hot_region.bed
• human_ancestor_GRCh37_e59.fa
• human_ancestor_GRCh37_e59.fa.fai
• motif.PFM
• motif.score.cut
• networks.tar.gz
• reference_genome.fa
• reference_genome.fa.fai
• regulatory.network
• sensitive.nc.bed
• ultra.conserved.hg19.bed
• user_annotations.tar.gz
• weighted.score.txt
• Alternative link to download tar.gz folder with all the data files FunSeq2_DC2.tar.gz
• Download FunSeq2_DC2 source code FunSeq2_DC2_source.tar
• Download FunSeq2 dependencies FunSeq2 dependencies
• Download sample variant input files for running FunSeq2 sample_input.bed sample_input.vcf